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Debian glibc issue #25

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opened 2026-02-28 04:20:28 -05:00 by deekerman · 6 comments
deekerman commented 2026-02-28 04:20:28 -05:00
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Originally created by @danglingptr0x0 on GitHub (Jun 12, 2023).

Hi,

First of all, great tool! Makes it easy to use an existing knowledge base and then dynamically ask about it using natural language. Wanted to build something like this myself, but you just saved me some time. Thank you!

But, after having fixed the requirements file as per #5, I have encountered an issue with libssl, which required manually building from source due to Debian not being a rolling distro. That fixed the libssl issue, but then, I encountered an issue with a version mismatch of glibc, which is apparently required by nodejs.

uname -a: Linux hostname 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux

yarn run v1.22.19
$ cd server && yarn dev
$ NODE_ENV=development nodemon --ignore documents --ignore vector-cache --trace-warnings index.js
[nodemon] 2.0.22
[nodemon] to restart at any time, enter `rs`
[nodemon] watching path(s): *.*
[nodemon] watching extensions: js,mjs,json
[nodemon] starting `node --trace-warnings index.js`
Example app listening on port 3001
/lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.35' not found (required by /home/<username>/git/anything-llm/server/node_modules/vectordb/x86_64-unknown-linux-gnu.node) Error: /lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.35' not found (required by /home/<username>/git/anything-llm/server/node_modules/vectordb/x86_64-unknown-linux-gnu.node)
    at Module._extensions..node (node:internal/modules/cjs/loader:1338:18)
    at Module.load (node:internal/modules/cjs/loader:1117:32)
    at Module._load (node:internal/modules/cjs/loader:958:12)
    at Module.require (node:internal/modules/cjs/loader:1141:19)
    at require (node:internal/modules/cjs/helpers:110:18)
    at getPlatformLibrary (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:23:16)
    at Object.<anonymous> (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:33:21)
    at Module._compile (node:internal/modules/cjs/loader:1254:14)
    at Module._extensions..js (node:internal/modules/cjs/loader:1308:10)
    at Module.load (node:internal/modules/cjs/loader:1117:32) {
  code: 'ERR_DLOPEN_FAILED'
}

This err is raised when the frontend is launched and opened in a browser. I haven't been able to fix the glibc issue, as opposed to libssl. I am afraid that it would mess up my Debian install.

Thanks

Originally created by @danglingptr0x0 on GitHub (Jun 12, 2023). Hi, First of all, great tool! Makes it easy to use an existing knowledge base and then dynamically ask about it using natural language. Wanted to build something like this myself, but you just saved me some time. Thank you! But, after having fixed the requirements file as per #5, I have encountered an issue with libssl, which required manually building from source due to Debian not being a rolling distro. That fixed the libssl issue, but then, I encountered an issue with a version mismatch of glibc, which is apparently required by nodejs. `uname -a`: `Linux hostname 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux` ``` yarn run v1.22.19 $ cd server && yarn dev $ NODE_ENV=development nodemon --ignore documents --ignore vector-cache --trace-warnings index.js [nodemon] 2.0.22 [nodemon] to restart at any time, enter `rs` [nodemon] watching path(s): *.* [nodemon] watching extensions: js,mjs,json [nodemon] starting `node --trace-warnings index.js` Example app listening on port 3001 /lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.35' not found (required by /home/<username>/git/anything-llm/server/node_modules/vectordb/x86_64-unknown-linux-gnu.node) Error: /lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.35' not found (required by /home/<username>/git/anything-llm/server/node_modules/vectordb/x86_64-unknown-linux-gnu.node) at Module._extensions..node (node:internal/modules/cjs/loader:1338:18) at Module.load (node:internal/modules/cjs/loader:1117:32) at Module._load (node:internal/modules/cjs/loader:958:12) at Module.require (node:internal/modules/cjs/loader:1141:19) at require (node:internal/modules/cjs/helpers:110:18) at getPlatformLibrary (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:23:16) at Object.<anonymous> (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:33:21) at Module._compile (node:internal/modules/cjs/loader:1254:14) at Module._extensions..js (node:internal/modules/cjs/loader:1308:10) at Module.load (node:internal/modules/cjs/loader:1117:32) { code: 'ERR_DLOPEN_FAILED' } ``` This err is raised when the frontend is launched and opened in a browser. I haven't been able to fix the glibc issue, as opposed to libssl. I am afraid that it would mess up my Debian install. Thanks
deekerman commented 2026-02-28 04:20:41 -05:00
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@frasergr commented on GitHub (Jun 13, 2023):

I also had a bunch of issues when trying to get it running on a node Docker image which is based on Debian 11. I ended up using a recent Ubuntu LTS image and the issues went away. I think all the issues I encountered (and there were more than two you've come across) were related to the vectordb package

@frasergr commented on GitHub (Jun 13, 2023): I also had a bunch of issues when trying to get it running on a node Docker image which is based on Debian 11. I ended up using a recent Ubuntu LTS image and the issues went away. I think all the issues I encountered (and there were more than two you've come across) were related to the `vectordb` [package](https://www.npmjs.com/package/vectordb)
deekerman commented 2026-02-28 04:20:46 -05:00
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@danglingptr0x0 commented on GitHub (Jun 13, 2023):

I also had a bunch of issues when trying to get it running on a node Docker image which is based on Debian 11. I ended up using a recent Ubuntu LTS image and the issues went away. I think all the issues I encountered (and there were more than two you've come across) were related to the vectordb package

@frasergr will try, thanks!

@danglingptr0x0 commented on GitHub (Jun 13, 2023): > I also had a bunch of issues when trying to get it running on a node Docker image which is based on Debian 11. I ended up using a recent Ubuntu LTS image and the issues went away. I think all the issues I encountered (and there were more than two you've come across) were related to the `vectordb` [package](https://www.npmjs.com/package/vectordb) @frasergr will try, thanks!
deekerman commented 2026-02-28 04:20:46 -05:00
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@danglingptr0x0 commented on GitHub (Jun 13, 2023):

Same issue under Ubuntu 20.04 (now running under distrobox)

..[$] <( (git)-[master]-)> yarn dev:server  
yarn run v1.22.19
$ cd server && yarn dev
$ NODE_ENV=development nodemon --ignore documents --ignore vector-cache --trace-warnings index.js
[nodemon] 2.0.22
[nodemon] to restart at any time, enter `rs`
[nodemon] watching path(s): *.*
[nodemon] watching extensions: js,mjs,json
[nodemon] starting `node --trace-warnings index.js`
Example app listening on port 3001
libssl.so.3: cannot open shared object file: No such file or directory Error: libssl.so.3: cannot open shared object file: No such file or directory
    at Module._extensions..node (node:internal/modules/cjs/loader:1338:18)
    at Module.load (node:internal/modules/cjs/loader:1117:32)
    at Module._load (node:internal/modules/cjs/loader:958:12)
    at Module.require (node:internal/modules/cjs/loader:1141:19)
    at require (node:internal/modules/cjs/helpers:110:18)
    at getPlatformLibrary (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:23:16)
    at Object.<anonymous> (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:33:21)
    at Module._compile (node:internal/modules/cjs/loader:1254:14)
    at Module._extensions..js (node:internal/modules/cjs/loader:1308:10)
    at Module.load (node:internal/modules/cjs/loader:1117:32) {
  code: 'ERR_DLOPEN_FAILED'
}
SELECT * FROM workspaces

I assume that the glibc issue would follow fixing this libssl issue, just like it did under my host.
Linux ubuntu-20-04.hostname 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 x86_64 x86_64 GNU/Linux

@danglingptr0x0 commented on GitHub (Jun 13, 2023): Same issue under Ubuntu 20.04 (now running under [distrobox](https://github.com/89luca89/distrobox)) ``` ..[$] <( (git)-[master]-)> yarn dev:server yarn run v1.22.19 $ cd server && yarn dev $ NODE_ENV=development nodemon --ignore documents --ignore vector-cache --trace-warnings index.js [nodemon] 2.0.22 [nodemon] to restart at any time, enter `rs` [nodemon] watching path(s): *.* [nodemon] watching extensions: js,mjs,json [nodemon] starting `node --trace-warnings index.js` Example app listening on port 3001 libssl.so.3: cannot open shared object file: No such file or directory Error: libssl.so.3: cannot open shared object file: No such file or directory at Module._extensions..node (node:internal/modules/cjs/loader:1338:18) at Module.load (node:internal/modules/cjs/loader:1117:32) at Module._load (node:internal/modules/cjs/loader:958:12) at Module.require (node:internal/modules/cjs/loader:1141:19) at require (node:internal/modules/cjs/helpers:110:18) at getPlatformLibrary (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:23:16) at Object.<anonymous> (/home/<username>/git/anything-llm/server/node_modules/vectordb/native.js:33:21) at Module._compile (node:internal/modules/cjs/loader:1254:14) at Module._extensions..js (node:internal/modules/cjs/loader:1308:10) at Module.load (node:internal/modules/cjs/loader:1117:32) { code: 'ERR_DLOPEN_FAILED' } SELECT * FROM workspaces ``` I assume that the glibc issue would follow fixing this libssl issue, just like it did under my host. `Linux ubuntu-20-04.hostname 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 x86_64 x86_64 GNU/Linux`
deekerman commented 2026-02-28 04:20:46 -05:00
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@frasergr commented on GitHub (Jun 13, 2023):

By recent Ubuntu LTS I meant 22.04 :)

Have a look at the Dockerfile to see if it may point you in the right direction for your use case: github.com/Mintplex-Labs/anything-llm@4e242a339f/docker/Dockerfile

@frasergr commented on GitHub (Jun 13, 2023): By recent Ubuntu LTS I meant 22.04 :) Have a look at the Dockerfile to see if it may point you in the right direction for your use case: https://github.com/Mintplex-Labs/anything-llm/blob/4e242a339fd934c1918dca65a097a1bc5eeca410/docker/Dockerfile
deekerman commented 2026-02-28 04:20:46 -05:00
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@danglingptr0x0 commented on GitHub (Jun 13, 2023):

By recent Ubuntu LTS I meant 22.04 :)

Have a look at the Dockerfile to see if it may point you in the right direction for your use case: github.com/Mintplex-Labs/anything-llm@4e242a339f/docker/Dockerfile

Yeah, my bad. I don't know why I assumed 20.04 😅

@danglingptr0x0 commented on GitHub (Jun 13, 2023): > By recent Ubuntu LTS I meant 22.04 :) > > Have a look at the Dockerfile to see if it may point you in the right direction for your use case: https://github.com/Mintplex-Labs/anything-llm/blob/4e242a339fd934c1918dca65a097a1bc5eeca410/docker/Dockerfile Yeah, my bad. I don't know why I assumed 20.04 😅
deekerman commented 2026-02-28 04:20:46 -05:00
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@danglingptr0x0 commented on GitHub (Jun 13, 2023):

Working for me under Debian 11 using distrobox to run Ubuntu 22.04.

Thanks, @frasergr!

@danglingptr0x0 commented on GitHub (Jun 13, 2023): Working for me under Debian 11 using [distrobox](https://github.com/89luca89/distrobox) to run Ubuntu 22.04. Thanks, @frasergr!
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